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2008
Townsend-Small, A, M.E. McClain, B. Hall, C. Llerena, J. L. Noruera,
and J. A. Brandes. 2008. Contributions of suspended organic matter from
mountain headwaters to the Amazon River: A one-year time series study in
the central Peruvian Andes. Geochimica et Cosmochimica Acta. 72(3):
732-740. doi:10.1016/j.gca.2007.11.02
2007
Brandes, J. A., Devol, A. H., and Deutsch, C., 2007. New Developments in
the Marine Nitrogen Cycle. Chemical Reviews 107,
577-589.
Brandes, J. A., Ingall, E., and Paterson, D., 2007b. Characterization of
minerals and organic phosphorus species in marine sediments using soft
X-ray fluorescence spectromicroscopy. Marine Chemistry
103 (3-4), 250-265.
Townsend-Small, A., J. L. Noguera, M. E. McClain, and J. A. Brandes
(2007), Radiocarbon and stable isotope geochemistry of organic matter in
the Amazon headwaters, Peruvian Andes, Global Biogeochem. Cycles,
21, GB2029, doi:10.1029/2006GB002835.
Townsend-Small, A. , M. J. McCarthy, J. A. Brandes, L. Yang, L. Zhang,
and W.S. Gardner (2007) Seasonal stable isotopic composition of nitrate
in Taihu Lake and major inflow rivers Hydrobiologia 581:
135-140.
2006
Devol, A. H., Uhlenhopp, A. G., Naqvi, S. W. A., Brandes, J. A.,
Jayakumar, D. A., Naik, H., Gaurin, S., Codispoti, L. A., and Yoshinari,
T., 2006. Denitrification rates and excess nitrogen gas concentrations
in the Arabian Sea oxygen deficient zone. Deep Sea Research Part I:
Oceanographic Research Papers 53, 1533-1547.
Haberstroh, PA, J. A Brandes, Y. Gélinas, A. F. Dickens, S. Wirick, and
G. D Cody (2006) Chemical composition of the graphitic black carbon
fraction in riverine and marine sediments at sub-micron scales using
Carbon X-ray Spectromicroscopy Geochimica et Cosmochimica Acta,
70, 1483-1494.
2005
Townsend-Small, A., J. A. Brandes and M. E. McClain. 2005 Chemical and
stable isotopic tracers of carbon and nitrogen sources and transport in
the Peruvian Andean Amazon Limnology and Oceanography
50(3) 672-685 .
2004
Cody, G. D., N. Z. Boctor, J. A. Brandes, T. R. Filley, R. M. Hazen and
H. S. Yoder Jr. 2004. Assaying the Catalytic Potential of Transition
Metal Sulfides for Prebiotic Carbon Fixation. Geochimica et
Cosmochimica Acta. 68(10):
2185–2196.
Brandes , J. A., S. Wirick, C. Lee, S. Wakeham, M. Peterson & G. D.
Cody. 2004. Examining marine particulate organic matter at sub-micron
scales using scanning transmission x-ray microscopy (STXM) and carbon
X-ray adsorption near edge structure (C-XANES) Marine Chemistry
92 (1-4) 107-121.
2003
Haberer, J.L. and J. A. Brandes 2003 A high sensitivity, low volume HPLC
based method to determine soluble reactive phosphate (SRP) in freshwater
and saltwater. Mar. Chem. 82 (3):185-196.
Sigman, D.M., R. Robinson, A. N. Knapp, A. van Geen, D. C. McCorkle, J.
A. Brandes and R. C. Thunell, R.C. (2003) Distinguishing between water
column and sedimentary denitrification in the Santa Barbara Basin using
the nitrogen isotopes of nitrate. Geochem. Geophys. Geosys. 4(5)
1040, doi:10.1029/2002GC000384
2002
Brandes JA & Devol AH. 2002. A marine fixed nitrogen isotopic budget:
Implications for Holocene nitrogen cycling. Global Biogeochemical
Cycles 16(4) 10.1029/2001GB00185.
Hazen, R.M., N. Boctor, J.A. Brandes, G.D. Cody, R.J. Hemley, A. Sharma,
and H.S. Yoder. 2002. High pressure and the origin of life. J.
Phys. Cond. Matter. 14(44):11489-94
2001
Cody, G.D., R.M. Hazen, J.A. Brandes, H. Morowitz, and H.S. Yoder, Jr.
2001. The Geochemical Roots of Archeic autrotrophic carbon fixation:
hydrothermal experiments in the system Citric-H2O +/-FeS +/-NiS.
Geochimica et Cosmochimica Acta 65(20):3557-3576.
Codispoti, L.A., J.A. Brandes, J.P. Christensen, A.H. Devol, S.W.A.
Naqvi, H.W. Paerl, and T. Yoshinari, 2001 The oceanic fixed nitrogen and
nitrous oxide budgets: Moving targets as we enter the anthropocene?,
Scientia Marina, 65, 85-105.
2000
Brandes, JA, Boctor, NZ,, Hazen RM, HS Yoder, Jr, and G. D. Cody. 2000.
Prebiotic Amino Acid Synthesis Pathways via a-keto Acids: An Alternative
to the Strecker Synthesis. Perspectives in Amino Acid and Protein
Geochemistry (G. A. Goodfriend, M.J. Collins, M. L. Fogel, S. A. Macko,
and J. F. Wehmiller, eds.). Oxford University Press, NY.
1998
Brandes, JA, Cody, GD, Cooper, BA, Hazen, RM, and HS Yoder, Jr. 1998.
Abiotic nitrogen reduction in the early Earth. Nature, 395
365-367.
Naqvi, S.W.A., T. Yoshinari, D.A. Jayakumar, M.A. Altabet, P.V.
Narvekar, A.H. Devol, J.A. Brandes, and L.A. Codispoti. 1998.
Budgetary and biogeochemical implications of N2O isotope signatures in
the Arabian Sea. Nature 394:462-464.
Naqvi, S.W.A., T. Yoshinari, J.A. Brandes, A.H. Devol, D.A. Jayakumar,
P.V. Narvekar, M.A. Altabet, and L.A. Codispoti. 1998. Nitrogen isotopic
studies in the suboxic Arabian Sea. Proc. Indian Acad. Sci.
107:367-378.
Brandes, J. A., Devol, A. H., Yoshinari, T., Jayakumar, D. A., and
Naqvi, S. W. A., 1998. Isotopic composition of nitrate in the central
Arabian Sea and eastern tropical North Pacific: A tracer for mixing and
nitrogen cycles. Limnol. Oceanogr. 43,
1680-1689.
1997
Brandes JA & Devol AH. 1997. Isotopic fractionation of nitrogen and
oxygen in coastal marine sediments. Geochimica et Cosmochimica Acta,
61(9) 1793-1801.
McClain ME, Richey JE, Brandes JA & TP Pimentel. 1997. Dissolved organic
matter and terrestrial-lotic linkages in the Central Amazonian Basin,
Brazil. Global Biogeochemical Cycles, 11(3)
295-312.
1996
Brandes J.A., McClain M.E. & T.P. Pimentel. 1996. 15N evidence for the
origin and cycling of inorganic nitrogen in a small Amazonian catchment.
Biogeochemistry 34(1) 45-56.
Brandes, J.A. and A.H. Devol. 1995. Simultaneous NO3 and O2 respiration
in coastal sediments: Evidence for Discrete Diagenesis. J. Mar.
Res. 53:771-797.
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